CryoFold
An experimental and computational initiative in understanding human heterochromatin protein (HP1) interactions with nucleosomes, employing innovative molecular simulation techniques to refine the molecular model of the HP1a nucleosome complex from cryo-EM data, revealing its role in genome regulation.
-Advanced use of CryoFold algorithm integrating Cascade MD Flexible Fitting (cMDFF), Modeling Employing Limited Data (MELD), and MDFF for atomic coordinate optimization of the HP1 model based on cryo-EM data
-Successful refinement of the HP1a-nucleosome model, with improved model-to-density correspondence
-Exploration of constitutive heterochromatin characteristics, particularly H3 histone methylation and its interaction with the H2A.Z nucleosome
